Our Global Ambassadors
Our Global Ambassadors help Applied Microbiology International expand our work across the globe. Together we help to accelerate discoveries and amplify the impact of applied microbiology.
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Global Ambassadors play a key role in meaningfully forming scientific collaborations in their regions to work towards our seven chosen Sustainable Development Goals (SDGs).
Caterina holds a Professorship position at the Veterinary School at Universidad Nacional, Costa Rica, associated to the Tropical Disease Research Program. Her research group is interested in understanding why microorganisms cause infection in humans and animals. Most disease-causing microorganisms in humans come from inappropriate contact with animals, where transgression of natural barriers is critical. Being able to understand how these biological barriers are transgressed, particularly how a microorganism can adapt to living in another host, is relevant in order to understand how the microorganisms that cause damage emerge. Bacteria of the genus Brucella share 96-98% similarity at genome level, despite infecting different species of animals. We use high-resolution techniques, such as the sequencing of complete genomes of Brucella, combined with molecular and cell biology approaches, in order to understand how specificity is stablished in different animal species.
Dr. Godoy is a native of Portugal, and has developed her career studying biodiversity associated with animal and human microbiomes using and developing metagenomics techniques. Her research is at the frontier of Microbial Ecology with Physiology, Metagenomics and Bioinformatics. After her NSF-funded postdoc studying with metagenomics an herbivorous bird -Hoatzin- at the DOE-JGI, she founded her first Microbial Ecology laboratory in Puerto Rico in 2012. In 2018 she joined the UPR School of Medicine and established the Microbiome Lab where she uses multi-omics approaches to study evolutionary dynamics of human infectious diseases and microbiomes. Her laboratory is dedicated to the study of host-microbial symbioses in diverse systems, especially characterizing microbiomes to understand the co-evolution, transmission and functions of microbial-host symbioses in a wide variety of phenotypes and biological systems. In her commitment to educate about the microbiome, she is also a collaborator of the “Microbiota Vault” effort, a project that seeks to conserve microbial communities around the world for the benefit of future generations. Among several active research projects, she is a researcher at the The University of Puerto Rico/University of Texas MD Anderson Cancer Center (MDACC) Partnership for Excellence in Cancer Research Grant. In addition, she is one of the multiple PIs of a study of the associations of oral microbiota with oral HPV infection among Hispanic adults and of a U54 grant focused on the prevention of HPV-related cancers in HIV+ populations in Latin America and the Caribbean.
Guadalupe Virginia Nevarez Moorillon
Dr. Nevárez-Moorillón has been a full-time professor at the School of Chemical Sciences, Autonomous University of Chihuahua, Mexico, for the last 35 years. She graduated as a bacteriological chemist from the Autonomous University of Chihuahua. She completed her Ph.D. in Biology from the University of North Texas studying the bioremediation of soil contaminated with hydrocarbons, under the supervision of Dr. Gerard Roland Vela. She is a member of the National Outstanding Researchers System of Mexico (Level II) and has been granted the National Award on Food Science and Technology. She is also a regular member of the Mexican Academy of Sciences
Dr. Matthew B. Sullivan's research focus is on the co-evolution of microbe and virus (phage) in environmental populations, as well as the impact of marine phages on microbe-mediated global biogeochemistry. Genomics and model-systems-based experimentation revealed that cyanobacterial phages often contain host photosynthesis genes, which are expressed during infection and act as a diversity generator for their numerically-dominant, globally-distributed photosynthetic hosts. Using a genomic and metagenomic toolkit, we query 'wild' viral populations to identify important hypotheses that can be evaluated using model-system approaches with appropriate phage isolates. The Sullivan lab is also developing single-cell assays to investigate questions that are critical for modeling and predicting the impacts of phage-host interactions in the wild. Specifically, these include gaining an understanding of the in situ host range of phage isolates, the metabolic capacity of to-date uncultured phage-host systems, the impacts of host growth status on phage production, and the fraction of microbial cells that are infected in wild populations.
Sean Gibbons received his PhD in biophysical sciences from the University of Chicago in 2015, dual-advised by Jack Gilbert and Maureen Coleman. His graduate work focused on using microbial communities as empirical models for testing ecological theory. Gibbons completed his postdoctoral training in Eric Alm’s laboratory in the Department of Biological Engineering at MIT from 2015-2018. His postdoctoral work focused on developing techniques to quantify individual-specific eco-evolutionary dynamics within the human gut microbiome. Gibbons investigates how the structure and composition of evolving ecological networks of microorganisms change across environmental gradients. In particular, he is interested in how ecological communities in the gut change and adapt to individual people over their lifespans (i.e. host genotype, host development and host behavior) and how these changes impact human health. His lab develops computational and experimental tools for investigating host-associated microbial communities to explore the interactions between ecology, evolution and ecosystem function, applying these insights to develop personalized interventions for improving human health and well-being.
Being a marine microbial ecologist, Dr. Forest Rohwer sees a coral reef as a finely-tuned community in which the microbes and viruses are major players. Recognizing their importance, he pioneered the use of metagenomics as a means to characterize these previously inscrutable organisms and to investigate their role in coral reef health and disease. For his scientific contributions, he has received numerous awards including the prestigious Young Investigators Award of the International Society of Microbial Ecology and the Marine Microbiology Initiative Investigator Award from the Gordon and Betty Moore Foundation.
Rima Fathi Kaddurah-Daouk
My research interest over the past decade has focused on scaling up biochemical knowledge for gaining a deeper understanding of the molecular basis of neurodegenerative and neuropsychiatric disorders and finding ways to optimize their treatment. I have also made seminal contributions to the development of the metabolomics field and applications of metabolomics for the study of drug effects, establishing foundations for “Pharmacometabolomics”, a discipline that complements and informs pharmacogenomics and enables Precision Medicine initiatives. Over the next five years, I will continue to expand on these directions and applications of a systems biochemical approach, hoping to contribute in significant ways to President Obama’s Alzheimer’s Initiative as well as to Precision Medicine national and global initiatives. At the heart of my research is a deeper understanding of neuropsychiatric disease mechanisms, disease heterogeneity, and optimization of treatment for patients based on genotype, metabotype, microbiome activity and environmental influences and strategies for personalizing and optimizing treatment outcomes.
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify novel microbial life and viral diversity. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon and Betty Moore Foundation as part of the Marine Microbiology Initiative. She conducted her postdoctoral training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of Medicine. She stepped into the Metagenome Program lead position in 2017. She is also the Berkeley Lab Lead for the National Microbiome Data Collaborative (NMDC).
I lead an interdisciplinary group of microbiome researchers committed to understanding host-associated microbes, reducing these complex microbial ecologies to molecular mechanism, and applying these lessons to improve the practice of medicine. Our three major topics of interest right now are pharmacology, nutrition, and phage biology. While we love sequencing and gnotobiotic mice, our work is question-driven not limited to a specific approach. Prior studies have ranged from the molecular (e.g., biochemistry, bacterial genetics, structural biology) to the organismal (e.g., gnotobiotic mice, conventional animals, and clinical trials) to the ecological (e.g., synthetic microbial communities and metagenomic sequencing). We embrace high-risk, high-reward projects and thrive on collaboration.
Work in our laboratory focuses on the numerous and diverse pathways of inorganic nitrogen and single carbon metabolism in bacteria and archaea. Using the tools of comparative genomics, molecular biology, physiology, and biochemistry we study how microorganisms process nitrogen and methane at the molecular, whole-cell, and ecosystem levels. Our goals are to track the evolution of nitrogen metabolism, predict how and when deleterious nitrogen oxide products are released to the environment, and define linkages between methane and nitrogen metabolism. The greenhouse gas nitrous oxide, the ozone depleting nitric oxide, and the groundwater polluting nitrate are the most significant of the nitrogen oxide pollutants created and released by microbial nitrogen metabolism. Single carbon metabolism, i.e. methane oxidation and carbon fixation, are intimately connected to the biogeochemical nitrogen cycle. By interrogating the linkages between single carbon and nitrogen metabolism, we can harness microorganisms to generate commercially viable bioproducts using single-carbon waste streams as feedstocks. We can also maximize microbial activities to increase productivity of vertical agriculture aquaponics systems without production of greenhouse gases.
Dr Oguntoyinbo achieved his BSc in Microbiology from Ondo State University, Nigeria 1989-1997, before persuing an MSc in Microbiology at the University of Ibadan, Nigeria 1995-1997. Dr Oguntoyinbo then went on to achieve his PhD in microbiology in 2003 from the University of Ibadan, Nigeria. His post-doctoral studies took place at the Institute of Food Research, Norwich, United Kingdom. Now, he is an Associate Professor and Research Mentor at Appalachian State University where his research primarily focusses on he molecular microbial ecology of fermented foods and beverages, the biochemical changes, sensory attributes and process optimization. This is aimed at provision of safe foods, improved quality and organoleptic properties through linkage of the microbiome in fermented foods with their metabolic signatures. In addition, he is testing hypotheses that can support industrial fermentation systems by maximizing microbial in situ growth dynamics, kinetics and functional properties. His research frontiers will continue to address unanswered questions on development of multifunctional starter cultures for North Carolina industrial fermented foods and beverages processing, agricultural postharvest value addition, reduction of food waste, improvement of nutritional intake and gastrointestinal health.
I was educated in New Zealand at the University of Waikato and completed a period of postdoctoral study there before moving to University College London as a Lecturer in 1985. After 16 years in London, I accepted the position at Professor of Microbiology in the Department of Biotechnology at the University of the Western Cape, Cape Town, where I was a Senior Professor and Director of the 60-strong Institute Microbial Biotechnology and Metagenomics. I moved to the University of Pretoria in May 2012 in the dual role as Director of both the University of Pretoria Institutional Research Theme in Genomics and my research group, the Centre for Microbial Ecology and Genomics. My research activities in microbial ecology encompass several fields, but mostly linked by the theme of ‘environmental extremes’. My collaborators include researchers in South Africa, Namibia, Kenya, Zambia, Argentina, New Zealand, the UK, Germany, and the US. Since my PhD studies, I have retained an interest in the ecology and enzymology of extreme thermophiles, organisms living in heated soils and hot water. For the past decade I have worked on the microbial ecology of Namib Desert soils and at the lower end of the biotic temperature scale, studying the microbiology of the Dry Valleys of Eastern Antarctica. My latest project is a continental-scale survey of soil microbial diversity. With 9 other partner nations, we are collecting 1000 soil samples from southern, eastern, western and northern Africa and aim to analyze the soil microbial community structures in the context of macro-environmental and geographic parameters.
After gaining my BSc in Microbiology/Biology from the University of Mosul, Iraq, I went on to attain an MSc in Microbiology at the University of Mosul in 2006. I also achieved my PhD in 2017, studying Microbiology and Microbial Genetics, University of Nottingham, UK. I now lecture in different practical subjects related to Biology such as Microbiology, Zoology, Cell biology, Histology, Immunology and Medical bacteriology at the School of Science/Biology Department/Duhok University/Kurdistan Region/Iraq. My research interest areas are antimicrobial resistance, mobile genetic elements and using bioinformatics tools to analyse different bacterial genomes.
Following my discharge from the Israeli navy, I studied medicine at the Hebrew University in Jerusalem. I then enrolled in a clinical career that included an all-round internship and a residency at the Hadassah-Hebrew University Medical Center. I then trained as a resident at the Hadassah Medical Center Gastroenterology Institute but developed a passion to perform basic science, leading me to relocate after a year to serve as a senior physician-scientist at the Tel Aviv Medical Center Institute for Gastroenterology and Liver Disease while performing, in parallel, my graduate studies in basic immunology at the Weizmann Institute of Science. In 2012, I was recruited to the Weizmann Institute of Science to establish the first microbiome-focused research group in the institute (and in the country). Our laboratory has now grown to include over 30 students, postdocs, and technicians from all over the world. We study many aspects of host–microbiome interactions and their potential involvement in human disease processes
Akua Obeng Forson
I am the appointed Head of Department for the Department of Medical Laboratory Sciences, University of Ghana where I teach clinical microbiology associated with infectious diseases in Africa. I am also involved in the training of a critical mass of undergraduate, and postgraduate students, that also includes institutional research assistants.
Mitesh holds an M.Sc. degree in Biotechnology from Tribhuvan University, Nepal. He is currently the Research Coordinator at Research Institute for Bioscience and Biotechnology (RIBB), Nepal. Apart from research, he also devotes some of his time to academia as an adjunct lecturer for molecular biology and genetic engineering at the Central Department of Biotechnology, Tribhuvan University. He has received several national and international research grants to focus on antimicrobial resistance as well as neglected tropical diseases such as Leishmaniasis. His current research focuses on understanding the prevalence and distribution of carbapenem-resistant Enterobacteriaceae in raw fruits and vegetables.
Supram Hosuru Subramanya
Supram HS, a medical microbiologist, graduated from Manipal University, India, in 2011. He pursued his Ph.D. (faculty of medicine) from Manipal Academy of Higher Education, India. At present working as Assistant professor of Medical Microbiology, Manipal College of Medical Sciences, Nepal. He is experienced in diagnostic microbiology and teaching undergraduate and postgraduate medical students. He is a member of the Infection Control Committee at Manipal Teaching Hospital. His area of research is infectious diseases, antimicrobial resistance (One Health perspective), and emerging fungal infections. He is specifically working in the field of AMR surveillance using One-Health genomic approach to investigate the flow of antimicrobial resistomes among Enterobacteriaceae (ESBL/CRE) and MRSA from rural farming communities of Nepal in order to understand the reservoirs and sources for human acquisition.
Dr P K Sarangi is an expert on the production of energy and materials from plant biomass and conducts leading research on microbial biomass utilization towards sustainable energy and materials towards wastes utilization. Dr. Sarangi’s main research is focused on microbial catalytic systems, Microbial cellulose utilization, bioconversion technologies, innovative biomass processing technologies and sustainable bioenergy futures. His expertise is in biomass degradation into bioenergy and biomaterials, lignocellulosic biomass conversion and second generation biofuel and environmental waste remediation. His research focuses for utilzation of agro wastes towards production of different value added phenolic flavour compounds.
Binod joined the School of Optometry and Vision Science, UNSW, Sydney in March 2020 to pursue his PhD project on corneal infection focusing Acanthamoeba keratitis under the supervision of Dr Nicole Carnt and Prof Mark Willcox of UNSW, Sydney and Prof Fiona L. Henriquez from the Infection and Microbiology Research Group at the University of the West of Scotland (UWS). Binod holds a Master’s in medical microbiology from Tribhuvan University, Nepal in 2017. After completion of his master, Binod worked in different organisations in his home country focusing on infectious diseases, antimicrobial resistance and infection control where he has cofounded a research institute in 2017 targeting infectious diseases and has received some noteworthy grants in the past. Binod has profound interest in interdisciplinary collaboration with diverse groups of people for open science, science advocacy, and science for all so, advocating, and championing for translational research are particular interests of Binod outside of his laboratory walls. On the same note, he has served as a community Ambassador of eLife Sciences Publications Ltd., UK (2019 - 2020) and an international representative for the Early Career Scientists (ECS) Committee, AMI (2018 - 2019).
Dr André Antunes is an environmental microbiologist, having devoted most of his research life to the study of microbial communities in marine and extreme environments. He is particularly interested in microbial biodiversity, changes in microbial community structure across environmental gradients, adaptations to extreme conditions and in cross-disciplinary research in the fields of geomicrobiology and astrobiology.
Dr. Mingfeng Cao is a professor at the Department of Chemical and Biochemical Engineering, Xiamen University, China. He received his Ph.D. degree at Nankai University in 2011, and then worked as a research associate at Tianjin Institute of Industrial Biotechnology, Chinese Academy of Science (2011-2013), a postdoctoral research associate at Iowa State University (2013-2018), and a research scientist in the Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign (2018-2021). His research focuses on the development of synthetic biology and metabolic engineering tools to engineer microorganisms to produce value-added chemicals
Prof Paul Cotter is Head of Food Biosciences and a Senior Principal Research Officer at Teagasc Food Research Centre at Teagasc, Moorepark, Fermoy, Ireland and a PI with the APC Microbiome Ireland and VistaMilk SFI Centres. He also co-ordinates the EU H2020 project, MASTER, and is a PI with Food for Health Ireland (FHI). He is a molecular microbiologist, with researchers in his lab focusing particularly on antimicrobial peptides (bacteriocins) and the microbiology of the gut (and its role in health and disease, including in athletes) and of foods (fermented and other dairy foods) and food production/processing facilities. Prof Cotter also leads the Teagasc/APC DNA sequencing facility and is an adjunct Professor at University College Cork and an adjunct lecturer at Munster Technical University. Prof Cotter’s Vision I laboratory was awarded the title of Irish Food Laboratory of the Year 2013, 2015, 2016, & 2018, and Agriculture Laboratory of the Year in 2019 and 2020. He has received awards from the Society for Applied Microbiology, ESCMID and FEMS and is the joint Section Head (applied microbiology) of Faculty of 1000 (Biology).
Professor Rahul Jain is an experienced Assistant Professfor with a demonstrated history of research work in the area of microbial biotechnology. Their research work is majorly focused on the production of cold-active lipase production and purification and screening of potential plant growth promoting bacteria for biofertilizers formulation. Their PhD focused in Biotechnology from Kumaun University, Nainital and GBPNIHESD, Almora.
I achieved my BSc in Environmental Microbiology from the University of Natal, South Africa in 1998. From here, I went on to achieve my PhD from the University of Natal. I am now a Senior Lecturer in Microbial Ecology. My research interests in microbiome science and technology are to understand and exploit complex interacting microbial communities. We achieve this by applying molecular techniques for the analysis of ecosystems that are impacted by decomposition, biochar, pollutants and waste products.
Juan Luis Ramos
Juan Luis Ramos is a Full Professor at the Spanish National Research Council (CSIC). From October 2013 to September 2017 he was the Director of the Biotechnology program of Abengoa Research. He received the Prize King Jaime I for his achievement in environmental research and the Lowff medal of FEMS in 2013 for achievements in environmental microbiology. In 1978 he graduated from the University of Seville where he obtained his Bachelor’s Degree. In 1981 he was awarded his PhD with a thesis on the bioconversion of solar energy into chemical energy. He spent almost two years as a post-doctoral researcher at the Unit of Nitrogen Fixation in Brighton (UK), supported by an EMBO fellowship and over two years at the Department of Medical Biochemistry in Geneva (Switzerland), where he started working on the metabolism of aromatic hydrocarbons in Pseudomonas. Prof. Ramos has been a diligent editor of Environmental Microbiology (since 2007), Environmental Microbiology Reports (since its foundation in 2008), and Microbial Biotechnology (since its foundation in 2007) journals.
Maurizio Petruccioli is full professor of General Microbiology and Environmental Biotechnology at the University of Tuscia, Viterbo (Italy). His research niterests include wastewater treatment, environmental science, genetic engineering, water quality and environmental remediation.